LOCUS       Tn6309                  5385 bp    DNA     linear       29-SEP-2020
DEFINITION  Leclercia adecarboxylata.
ACCESSION   
VERSION
KEYWORDS    .
SOURCE      Leclercia adecarboxylata
  ORGANISM  Leclercia adecarboxylata
            Unclassified.
REFERENCE   1  (bases 1 to 5385)
  AUTHORS   Zhou,D.
  TITLE     Complete sequence of Tn6309
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5385)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Beijing, Beijing 100071, China
FEATURES             Location/Qualifiers
     source          1..5385
                     /organism="Leclercia adecarboxylata"
                     /mol_type="genomic DNA"
     repeat_region   complement(1..14)
                     /gene="IRR_IS26"
     CDS             complement(53..757)
                     /gene="tnpA"
                     /codon_start=1
                     /product="IS26 transposase"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     repeat_region   complement(807..820)
                     /gene="IRL_IS26"
     CDS             complement(1289..1603)
                     /gene="orf315"
                     /codon_start=1
                     /product="DNA-binding regulator"
                     /translation="MLTNDRGRQVRRARLLRHMKQSHLAELMGVDQATVSRWERGTLA
                     LSDGRWSAVLQLLTGPSDSSYDAALKRLVQSSAHKVHLVATGHIVCSRHLRPGKGNCG
                     LT"
     CDS             complement(1590..2249)
                     /gene="tetR(C)"
                     /codon_start=1
                     /product="Tetracycline repressor protein, class C"
                     /translation="MNKLQREAVIRTALELLNDVGMEGLTTRRLAERLGVQQPALYWH
                     FKNKRALLDALAEAMLTINHTHSTPRDDDDWRSFLKGNACSFRRALLAYRDGARIHAG
                     TRPAAPQMEKADAQLRFLCDAGFSAGDATYALMAISYFTVGAVLEQQASEADAEERGE
                     DQLTTSASTMPARLQSAMKIVYEGGPDAAFERGLALIIGGLEKMRLTTNDIEVLKNVD
                     E"
     CDS             2342..3532
                     /gene="tetA(C)"
                     /codon_start=1
                     /product="Tetracycline resistance protein, class C"
                     /translation="MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASH
                     YGVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAG
                     RIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLH
                     APFLAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTV
                     FFIMQLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGE
                     KQAIIAGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQG
                     QLQGSLAALTSLTSIIGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSR
                     ATST"
     CDS             complement(3588..3716)
                     /gene="orf129"
                     /codon_start=1
                     /product="Protein Kinase"
                     /translation="MRTRGQDPTLPEMRRVRLLEMADAMDMFCQGLVCAFTVLRKN"
     CDS             3804..3950
                     /gene="mobC"
                     /codon_start=1
                     /product="Mobilization protein"
                     /translation="-
                     KRLLLQNVCDLSNNMNGLRFPCFVKSGNAEVPYVLLKLPATESGTNR"
     CDS             3982..4260
                     /gene="resD"
                     /codon_start=1
                     /product="Resolvase"
                     /translation="MSGLISYSELQQSAPLPVAIDYPAALALRQMALIQGKLPKYLLA
                     PEVSALHHYVPDLHRRMLLATLWNTYICINEALALTLSDFSLVPPYHC"
     CDS             4257..4478
                     /gene="queG"
                     /codon_start=1
                     /product="Epoxyqueuosine reductase"
                     /translation="MKATAHHAFADIEPCRPIGLRLSAQETAGDERILFRRLVAVALG
                     VAADEPAGVALAEQRKADLATTSPRPPIV"
     repeat_region   complement(4566..4579)
                     /gene="IRR_IS26"
     CDS             complement(4618..5322)
                     /gene="tnpA"
                     /codon_start=1
                     /product="IS26 transposase"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     repeat_region   complement(5372..5385)
                     /gene="IRL_IS26"
ORIGIN      
        1 ggcactgttg caaagttagc gatgaggcag ccttttgtct tattcaaagg ccttacattt
       61 caaaaactct gcttaccagg cgcatttcgc ccaggggatc accataataa aatgctgagg
      121 cctggccttt gcgtagtgca cgcatcacct caataccttt gatggtggcg taagccgtct
      181 tcatggattt aaatcccagc gtggcgccga ttatccgttt cagtttgcca tgatcgcatt
      241 caatcacgtt gttccggtac ttaatctgtc ggtgttcaac gtcagacggg caccggcctt
      301 cgcgtttgag cagagcaagc gcgcgaccat aggcgggcgc tttatccgtg ttgatgaatc
      361 gcgggatctg ccacttcttc acgttgttga ggattttacc cagaaaccgg tatgcagctt
      421 tgctgttacg acgggaggag agataaaaat cgacagtgcg gccccggctg tcgacggccc
      481 ggtacagata cgcccagcgg ccattgacct tcacgtaggt ttcatccatg tgccacgggc
      541 aaagatcgga agggttacgc cagtaccagc gcagccgttt ttccatttca ggcgcataac
      601 gctgaaccca gcggtaaatc gtggagtgat cgacattcac tccgcgttca gccagcatct
      661 cctgcagctc acggtaactg atgccgtatt tgcagtacca gcgtacggcc cacagaatga
      721 tgtcacgctg aaaatgccgg cctttgaatg ggttcatgtg cagctccatc agcaaaaggg
      781 gatgataagt ttatcaccac cgactatttg caacagtgcc cataggcttc atcagcgcct
      841 gactggcgag cacgattccg gccctagccg caggatcgcg caggacgacc tagttacgaa
      901 ccaggccgag tgttcctgac atccatcggc accatagttc tgcttatccg gcacgcgcgc
      961 gtcaggggtg tggtgaacta caaagcagac ccgttgaggt tatcagttcg atgcacaatc
     1021 agcagcgcat aaaatatgca caagaacagg agcacccttc gcattaagct gtggtggtaa
     1081 caagtagtgc cgggctacca tcagcgagca tgatgcgctc ccacagcatt cgccttggca
     1141 gtatggaagt tcctcgctcc agttcgggcc ggtatccacc tcgagtgacc ccagccgccc
     1201 ctcatgccaa ccgagcccat taagcgcaga gtcggccgca actatctcgg ggacgcataa
     1261 acacgcagcg atttaccaag gagttcggct aggtcaatcc gcaattccct ttgcctggcc
     1321 ggagatgccg cgagcaaaca atgtgtccgg tcgctaccag atggactttg tgggcggagg
     1381 attgcaccag acgcttcagc gcagcgtcgt acgatgaatc ggaaggcccg gtaagcaatt
     1441 gaagaaccgc tgaccacctc ccatccgaca atgcaagggt gccccgctcc cagcgcgaca
     1501 cggttgcctg atccacaccc attaattcag ctaggtgact ttgcttcata tgacgaagca
     1561 accgcgccct ccgcacctgc cgccccctgt cattcgtcaa cattcttcag cacctcaatg
     1621 tcgttcgtag tgagcctcat tttttcaaga ccgccgatga tgagagccag gcctcgctcg
     1681 aatgccgcgt ccggaccgcc ttcgtagacg attttcatcg cgctctgtag gcgcgccggc
     1741 atcgtagacg ctgaggtggt caactgatct tcgccccgct cctcggcgtc tgcctcgcta
     1801 gcttgctgct caagaacagc gccgacggtg aagtagctga ttgccatcaa cgcataggtc
     1861 gcgtcacctg ccgaaaagcc agcatcgcaa aggaagcgaa gctgcgcgtc ggctttttcc
     1921 atctgcggcg cggctggccg cgtcccggca tgaatacgcg cgccatcgcg ataagcgagc
     1981 aacgcccgtc gaaaactgca tgcattgccc ttcaggaacg aacgccagtc gtcgtcatcc
     2041 cttggcgtcg aatgcgtgtg atttatcgtc agcatggctt cggcaagtgc gtcgagcaac
     2101 gcacgcttgt tcttgaaatg ccagtagagc gctggctgtt gcaccccgag gcgctcagcc
     2161 agtcggcgcg tcgttagacc ttccatgccc acgtcgttaa gcagttcgag cgcggttcgg
     2221 atcacggcct cgcgttggag cttgttcatt cgcgaattct catgtttgac agcttatcat
     2281 cgataagctt taatgcggta gtttatcaca gttaaattgc taacgcagtc aggcaccgtg
     2341 tatgaaatct aacaatgcgc tcatcgtcat cctcggcacc gtcaccctgg atgctgtagg
     2401 cataggcttg gttatgccgg tactgccggg cctcttgcgg gatatcgtcc attccgacag
     2461 catcgccagt cactatggcg tgctgctagc gctatatgcg ttgatgcaat ttctatgcgc
     2521 acccgttctc ggagcactgt ccgaccgctt tggccgccgc ccagtcctgc tcgcttcgct
     2581 acttggagcc actatcgact acgcgatcat ggcgaccaca cccgtcctgt ggatcctcta
     2641 cgccggacgc atcgtggccg gcatcaccgg cgccacaggt gcggttgctg gcgcctatat
     2701 cgccgacatc accgatgggg aagatcgggc tcgccacttc gggctcatga gcgcttgttt
     2761 cggcgtgggt atggtggcag gccccgtggc cgggggactg ttgggcgcca tctccttgca
     2821 tgcaccattc cttgcggcgg cggtgctcaa cggcctcaac ctactactgg gctgcttcct
     2881 aatgcaggag tcgcataagg gagagcgtcg accgatgccc ttgagagcct tcaacccagt
     2941 cagctccttc cggtgggcgc ggggcatgac tatcgtcgcc gcacttatga ctgtcttctt
     3001 tatcatgcaa ctcgtaggac aggtgccggc agcgctctgg gtcattttcg gcgaggaccg
     3061 ctttcgctgg agcgcgacga tgatcggcct gtcgcttgcg gtattcggaa tcttgcacgc
     3121 cctcgctcaa gccttcgtca ctggtcccgc caccaaacgt ttcggcgaga agcaggccat
     3181 tatcgccggc atggcggccg acgcgctggg ctacgtcttg ctggcgttcg cgacgcgagg
     3241 ctggatggcc ttccccatta tgattcttct cgcttccggc ggcatcggga tgcccgcgtt
     3301 gcaggccatg ctgtccaggc aggtagatga cgaccatcag ggacagcttc aaggatcgct
     3361 cgcggctctt accagcctaa cttcgatcat tggaccgctg atcgtcacgg cgatttatgc
     3421 cgcctcggcg agcacatgga acgggttggc atggattgta ggcgccgccc tataccttgt
     3481 ctgcctcccc gcgttgcgtc gcggtgcatg gagccgggcc acctcgacct gaatggaagc
     3541 cggcggcacc tcgctaacgg attcaccact ccaagaattg gagccaatca attcttgcgg
     3601 agaactgtga atgcgcaaac caacccttgg cagaacatat ccatcgcgtc cgccatctcc
     3661 agcagccgca cgcggcgcat ctcgggcagc gttgggtcct ggccacgggt gcgcatgatc
     3721 gtgctcctgt cgttgaggac ccggctaggc tggcggggtt gccttactgg ttagcagaat
     3781 gaatcaccga tacgcgagcg aacgtgaagc gactgctgct gcaaaacgtc tgcgacctga
     3841 gcaacaacat gaatggtctt cggtttccgt gtttcgtaaa gtctggaaac gcggaagtcc
     3901 cctacgtgct gctgaagttg cccgcaacag agagtggaac caaccggtga taccacgata
     3961 ctatgactga gagtcaacgc catgagcggc ctcatttctt attctgagtt acaacagtcc
     4021 gcaccgctgc cggtagctat tgactatccg gctgcactag ccctgcgtca gatggctctg
     4081 atccaaggca aactgccaaa atatctgctg gcaccggaag tcagcgccct gcaccattat
     4141 gttccggatc tgcatcgcag gatgctgctg gctaccctgt ggaacaccta catctgtatt
     4201 aacgaagcgc tggcattgac cctgagtgat ttttctctgg tgccgcctta tcactgttga
     4261 aggccaccgc tcatcacgcg tttgctgaca ttgagccctg ccggccgatc ggcctgagac
     4321 tctcagcaca ggagacggcg ggtgacgagc gtatactttt tcgacgcttg gttgcggtcg
     4381 cgctaggcgt ggccgccgac gaacccgctg gtgtcgccct tgcggagcag cgcaaggcgg
     4441 accttgccac gacatcccct cgcccgccga tcgtctaaat tcgtcgaggt taagaaattc
     4501 ccgctccggc gaggccatca ccatcaccgg cgtcaggtag tggacatggc agcagcgcac
     4561 gcaggggcac tgttgcaaag ttagcgatga ggcagccttt tgtcttattc aaaggcctta
     4621 catttcaaaa actctgctta ccaggcgcat ttcgcccagg ggatcaccat aataaaatgc
     4681 tgaggcctgg cctttgcgta gtgcacgcat cacctcaata cctttgatgg tggcgtaagc
     4741 cgtcttcatg gatttaaatc ccagcgtggc gccgattatc cgtttcagtt tgccatgatc
     4801 gcattcaatc acgttgttcc ggtacttaat ctgtcggtgt tcaacgtcag acgggcaccg
     4861 gccttcgcgt ttgagcagag caagcgcgcg accataggcg ggcgctttat ccgtgttgat
     4921 gaatcgcggg atctgccact tcttcacgtt gttgaggatt ttacccagaa accggtatgc
     4981 agctttgctg ttacgacggg aggagagata aaaatcgaca gtgcggcccc ggctgtcgac
     5041 ggcccggtac agatacgccc agcggccatt gaccttcacg taggtttcat ccatgtgcca
     5101 cgggcaaaga tcggaagggt tacgccagta ccagcgcagc cgtttttcca tttcaggcgc
     5161 ataacgctga acccagcggt aaatcgtgga gtgatcgaca ttcactccgc gttcagccag
     5221 catctcctgc agctcacggt aactgatgcc gtatttgcag taccagcgta cggcccacag
     5281 aatgatgtca cgctgaaaat gccggccttt gaatgggttc atgtgcagct ccatcagcaa
     5341 aaggggatga taagtttatc accaccgact atttgcaaca gtgcc
//
