LOCUS       Tn5501                  5594 bp    DNA     linear       29-SEP-2020
DEFINITION  Pseudomonas putida.
ACCESSION   
VERSION
KEYWORDS    .
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Unclassified.
REFERENCE   1  (bases 1 to 5594)
  AUTHORS   Zhou,D.
  TITLE     Complete sequence of Tn5501
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5594)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Beijing, Beijing 100071, China
FEATURES             Location/Qualifiers
     source          1..5594
                     /organism="Pseudomonas putida"
                     /mol_type="genomic DNA"
     repeat_region   1..38
                     /gene="IRL_Tn5501"
     CDS             complement(33..3044)
                     /gene="tnpA"
                     /codon_start=1
                     /product="Tn5501 transposase"
                     /translation="MSNKNKLLTVFSDAEQEALYGLPDFDDAQRLEYLALTESELVRQ
                     QRPSLQAQVYCVLQIGYFKAKHAFFRFDWHEVEDDCAFVLSRYFHGERFERKAITKHE
                     HYSQRGQIAELFGYRSWAASFLPQLAQQAEQIVRRDVMPGFVAAELIVWLSEHKIIRP
                     GHTTLQELVSEALSTERRALGGLLAEVLDESAKAALGQLLVRDDTLSQLAALKQDAKD
                     FGWRQMAGEREKRATLKSLHGIAKALLPKLGISQQNLLYYASLANFYTVHDLRHLKAE
                     QTRLYLLCYAWVRYRQLTDNLVDAMAFHMKKLEDESARVRNSPLSPNSCDAIRKRAVG
                     RLLSLYVDDSVADPTPFGEVRQRAYKIMSRELLQNTAHGMSVKPLNKLALHWQAVDGL
                     AERIRRHLRPLYVALDFRRTAPDNPWLAALTWAKSVFAKQQRLSQRPLDECPAATLPK
                     RLRPYLLMFDRKARRQACMPIGYEFWLYRQSGNASRRAELYIDDSLQHRHLSDELVSM
                     DEKAAVLAQMDIPFLRQPVSAQLDALAAELRAQWVAFNRELKQGKLTHLEYDKDTQRL
                     TWRKPRGRTRRLRAEALYEQLPYCDVADVFRFVNGQCQFCPALTPLQPRYAKKVADAT
                     RLMAVIIAQAMNHGNQVMARTSDIPYHVLESTYQQYLGQATLHVANDCISNAIAALPI
                     FPHYSFDLDSLYGAVDGQKFGVERPTVKARYSRKYFGRGKGVVAYTLLCNHVPLNGYL
                     IGAHEYEAHHVFDIWYRNTSDIVPSAITGDMHSINKANFAILHWFGLRFEPRFTDLDD
                     QLQELYCADDLALYEKCLIRPAGRSTGKLIVGEKANIDRIVATLGLKEMTQGTLIRKL
                     CTYTAPNPTRAIFEFDKLIRSIYTLRYLHPQLERNVHRSQNRIESYHQLARAIAQVGG
                     KKELTGRTDIEIEISNQCARLIGNAIIFYNSAILSLLLTKYEAAAMPRAALITQMCPA
                     WRDILLNGHYTFKTDGKFIDLDALVAGLELG"
     CDS             complement(3041..3628)
                     /gene="tnpR"
                     /codon_start=1
                     /product="Tn5501 resolvase"
                     /translation="MLVGYMRVSADSDRQSTDLPRRAAAAGVDPRHLFEDRPSGAKDD
                     RAGLAGRLSFVRAGDVLVVWKLDRLGRSLSHLLAIVTSLKDKRVAFRSLTENLDTTTP
                     SGEFLFQVFGALAQYERALIQERVVAGLAAARKRGRIGGRRRAITGEKLDAIVAALDG
                     GMSKAAVCRNLIVKRTTLIETLTPSRLAWCGKDGR"
     misc_recomb     3653..3763
                     /gene="res"
     misc_feature    4523..4855
                     /gene="orf333"
                     /product="Hypothetical protein"
     repeat_region   5557..5594
                     /gene="IRR_Tn5501"
ORIGIN      
        1 ggggttgtac gccggaatcc cagaaatttc cgtcagccca gctccagtcc cgccacgagc
       61 gcatccaggt cgatgaactt gccgtcagtc ttgaaggtgt aatgcccgtt cagcaggatg
      121 tcccgccagg ctgggcacat ctgcgtgatc aacgcagccc ttggcattgc agctgcctcg
      181 tacttcgtca gcagcaggga caggatcgcc gagttgtaga agatgatcgc gttgccgatc
      241 agcctggcgc actggttgct gatctcgatt tcgatgtcgg tgcggccggt caattccttc
      301 ttcccaccga cttgggcgat ggctcgagct agctggtgat aggactcaat gcggttctgc
      361 gagcggtgaa cattacgctc cagttgcggg tgcaggtagc gcagtgtgta gatactgcgg
      421 atgagcttgt cgaactcgaa gattgcgcgc gtcgggttcg gcgccgtata ggtgcacagc
      481 ttgcggatca gcgtgccctg cgtcatttcc ttcaggccca gtgtggcgac gattcggtcg
      541 atgttcgcct tctcaccgac gatgagcttg ccggtcgatc tgccagccgg ccggatcagg
      601 catttctcgt acaatgccag atcatcggcg caatacagct cctgcaactg gtcgtcgagg
      661 tcggtgaagc gcggctcgaa acgaagtccg aaccagtgca ggatggcgaa gttggccttg
      721 ttgatgctgt gcatgtcgcc ggtgatcgcg ctcggcacga tgtccgacgt gttgcggtac
      781 cagatgtcga acacgtggtg agcctcgtac tcgtgtgcgc ctatcaggta gccgttcaac
      841 ggcacgtgat tgcacagcag cgtgtaggcg acgacgccct tgccgcggcc gaaatatttg
      901 cgcgagtagc gcgccttcac agttggtcgc tcgacgccga atttctgccc atcaacggca
      961 ccgtacaacg aatcgaggtc gaacgagtaa tgcgggaaga tcggcagtgc ggcgatggcg
     1021 ttgctgatgc aatcgttggc cacatgtagc gtcgcctggc cgaggtactg ctggtaggta
     1081 ctctccagga cgtggtacgg gatgtcgctg gtacgtgcca taacctggtt gccgtggttc
     1141 atggcttggg caatgatcac cgccatcaga cgtgtcgcgt cggctacctt cttcgcatag
     1201 cgtggctgca atggtgtcag cgccggacag aactggcact ggccgttgac gaagcgaaac
     1261 acgtcggcga catcgcagta tggcagttgc tcgtagagag cttctgcgcg cagccttctg
     1321 gttctccccc ttggcttgcg ccaggtcagt ctctgcgtgt ccttgtcgta ttccaggtgc
     1381 gtcagcttgc cctgtttcag ctcgcgattg aacgccaccc attgcgcacg caactcggcc
     1441 gccagtgcat cgagctgggc actgaccggc tgccgcagga aggggatgtc catctgcgcg
     1501 agcacggcgg ctttctcgtc catcgaaacc aactcgtcgg acaaatgccg gtgctgcaag
     1561 ctatcgtcaa tgtagagctc ggcccgcctg gaagcgtttc ctgactgacg gtaaagccag
     1621 aattcgtaac cgatcggcat gcaggcctgt cggcgtgcct tccgatcgaa catcagcagg
     1681 tacggacgca agcgtttcgg cagcgttgcc gccggacatt cgtcgagtgg ccgttgtgat
     1741 aggcgctgct gcttggcgaa cacgctcttg gcccaagtca gcgccgcgag ccatgggtta
     1801 tcgggggccg tgcggcggaa gtcgagcgcg acgtacagcg gccgtagatg gcgtcgaatg
     1861 cgttcggcca ggccgtccac cgcctgccag tgcagcgcca gtttgttcag tggcttgacg
     1921 ctcatgccgt gcgccgtgtt ttgcagcaat tccctggaca tgattttgta ggcgcgttgg
     1981 cgcacctcgc cgaacggcgt cggatcggcc acgctgtcgt ccacgtacag cgacagcagg
     2041 cggccaactg cgcgtttcct gatggcgtcg cagctgttcg gcgacaaagg actgtttcgc
     2101 acccgtgcgc tctcgtcctc aagttttttc atgtggaagg ccatcgcgtc gaccaggttg
     2161 tcggtgagct gccggtaacg tacccaggca tagcacagca ggtagagccg ggtctgctcc
     2221 gccttcaggt ggcgcaggtc atggacggta tagaagttcg ccaggctcgc gtagtacagc
     2281 aggttctgct gcgagatgcc gagcttgggc agcagcgcct tggcgatccc gtgcaaggac
     2341 ttcagcgtgg cgcgcttctc gcgctcccct gccatctgac gccagccgaa atctttagcg
     2401 tcctgcttga gcgctgccag ttgagacagg gtgtcgtcac gcaccaggag ctggcccagc
     2461 gcagctttgg ccgattcgtc caacacttct gccagcaagc cgcccaaggc cctgcgttcg
     2521 gtggacaggg cttcactgac cagctcttgt aaggtggtgt ggccgggccg gatgattttg
     2581 tgctcgctga gccaaacgat cagttcggcg gccacgaatc ctggcattac gtcgcgccgc
     2641 acgatctgtt cagcctgctg tgccagttgc ggcaggaagc tagccgccca cgaccggtag
     2701 ccgaacagtt cggcgatctg acccctctgg ctgtagtgct catgcttggt gatcgccttg
     2761 cgttcgaacc gttcgccgtg gaaatagcga ctcagcacga aggcgcaatc gtcctcgacc
     2821 tcatgccaat cgaagcggaa gaaagcatgc ttggccttga agtagccgat ctgcaagacg
     2881 caatagactt gggcctgcag gctaggccgc tgctggcgaa cgagttcaga ttcggtcaac
     2941 gccaggtatt ccagccgctg agcatcgtcg aagtccggta ggccgtacaa ggcttcctgc
     3001 tctgcgtcag aaaagacggt gagtagctta ttcttgttgc tcatcgaccg tccttcccgc
     3061 accacgccaa cctgctcggc gtcaatgttt cgatcaacgt agtgcgcttg acaattaagt
     3121 tgcggcacac cgccgcctta gacatgccgc catcgagcgc ggcgacgatg gcgtccagct
     3181 tctcaccagt gatcgctctg cgccggccgc cgatccggcc gcgtttgcgt gcggcggcca
     3241 agcccgcgac gacgcgctcc tgaatcaagg cgcgctcgta ctgcgcgagc gcaccgaaca
     3301 cctggaacag gaattcgccc gagggcgtcg tagtgtccag gttctctgtc agcgagcgga
     3361 acgccacccg cttgtccttg agcgaagtca caatggcgag caggtgcgac agagagcgac
     3421 cgagccggtc gagtttccac accaccagca catcgccggc tcgaacgaag ctcaagcgcc
     3481 cggccaagcc ggcacggtca tccttcgcgc cagagggacg atcctcaaac aggtgacgcg
     3541 gatcgacgcc ggcggcagca gcgcgtcgcg gtaagtccgt gctctggcgg tcggagtccg
     3601 cagacacgcg catgtagcca accaacatag gcggataacc atcaaaaaca ggtttccgca
     3661 taatagtgaa tagcgataga gttttccgta catttttgag ggggtgttgc acaggtagca
     3721 cagcgcggct gacagcctgt cgcaaaacaa atgttttacg acacctcctt gaggttgccg
     3781 cgtttacatc attacctgaa caggtataaa attccgtcat gacaaacaaa gaaaaaccgc
     3841 tcgaatggat cgcgagcagc cacaaggatt tgatggcgtt gcgtccgacg tgcgtcgccg
     3901 tttcggttac gcgctctcgt tggcgcagat aggcgatcag gatgacgcag caaaggtgct
     3961 caaggggttc ggtggtgccg gcgtgctgga ggtcgtcgaa gacgatgccg gcggcaccta
     4021 tcgagcggta tacacggtca agtttgcgga agcggtgttc gtcctgcact gcttccagaa
     4081 gaagagcaag agcggaatcg ccacgccttt ggccgacatg gacatcatcc gcgctcggct
     4141 gaaggtggcc gaggtattgg cacaggagct acaaatgcaa aaacgaatca ttgaagggct
     4201 gtcgaggttc agcgcagctc gggcaacgtc tttgccgacc ttggactgcc tgacgctgaa
     4261 aagctcaaga tcaagaccgg cctggtggtc gagatcagga ggccatgcgg ccttgggctg
     4321 actcaacaag cggcggccaa acgcatgggc atcccgcaac cgaaggtgtc gggcatgatg
     4381 cgcggcgact tcaccaatct atccgaacgc aagctgatgg attgtctgaa tcgcctcggc
     4441 tacgacatcg aaatcaaggt acggccagca gccgagccga tcgggcatct aacgtcgcaa
     4501 ccgcttaatc ggagccctcc tgatggcagc ccgcatcacg acgacgaatg ggacgaactg
     4561 actcccgaga atttcgatac cacggcactg ctgcgtgcag tcgatgccgt ggacgtgctg
     4621 cgcggcgatt tgaatgacag cgcagacggc acctccgcaa ctgcgcaccg acctgttgaa
     4681 gctgcatcaa ctggcaatgg ccgcgttcaa cgagggatca cgcagccgag tggctgagct
     4741 atttgatctc gccgtggatc ttcaggatca ggttgatcat ctgatgacct cgctggaaca
     4801 agtgcaagaa accctgtccc ggttgacggc gctctaccca gaaagcctgt cctgaatgtt
     4861 cttggagaca accacatcat gagccgcagc cgccgcaaaa cgcccatcgt tgggcacacg
     4921 acctgccgta gcgagcgcga ggacaagaaa ctctggcatc agcgctggcg aactcacgag
     4981 cgcaccctgg gccagcgtcg ccggaagctc tatgcgccca tctgcctcta ctggaaaacc
     5041 aggtcagcaa cgtctggtcg atgggtaagg atggccgctc ctactggccc atcaagcgcc
     5101 aggccacggc ggatgcatta gccaacgaca agggagcaat cgcaagaggc gcctccctga
     5161 aaaagcgtcc ttggcgcaag tggatgagca aatgaacctg tccaccatcg agggctggct
     5221 agtcttgggc ggaatcgctg aagaagcaga actcccagcc ggctacgagg gcacggcgag
     5281 ccagaggcgc atcgggcctg cgaggtgatc caggagcgga ttcgagagca cgtcgtcgcc
     5341 accaatgaca tgcggctgtt cggcctgctg cactgcttgg gcaggcgtcg tgcgcatgga
     5401 gcaagcgctg tggccggaag aatatggcgg atgacccgcg aggtcgagga agctctccga
     5461 gaggccgacg accccaacgc caagtcgtac acccacgaag aatcatgcgg cgatgcagga
     5521 actcatcgac caagagcgag acaagccatg ttgatcggct gacggaaatt tctgggtttc
     5581 cggcttacaa cccc
//
