LOCUS       Tn5406                  5461 bp    DNA     linear       29-SEP-2020
DEFINITION  Staphylococcus aureus.
ACCESSION   
VERSION
KEYWORDS    .
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Unclassified.
REFERENCE   1  (bases 1 to 5461)
  AUTHORS   Zhou,D.
  TITLE     Complete sequence of Tn5406
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5461)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Beijing, Beijing 100071, China
FEATURES             Location/Qualifiers
     source          1..5461
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
     CDS             134..1219
                     /gene="tnpA"
                     /codon_start=1
                     /product="Tn554 transposase"
                     /translation="MKVQKIVVDNKAYPLFILLDEQFEVVEPVMSFIKYLDNTNKSPN
                     TIKTYCYHLKLFYVFMQQRKISLDEIQFDELANFVGWLRNPTENANVIDIHPKEAKRE
                     ESTVNAILNAVISYLEYLSRSGGFKMLDLFNETRGRNYKGFLHHVSKGKPYKRNVLKL
                     REKKKMIRTLNHSEVKEIVEACHTLRDKLIIMLMYEGGMRIGEVLSLRLADIVTWDNQ
                     VHITPREESLNGAYIKLRKERVIHVSKELMALYTDYLVHEYYDELEHDYVFIALKESH
                     FGQPLKYQSVLDLVRRLNKRTGIVFTPHTLRHTHATELIRNGWDAAYVQKRLGHAQVQ
                     TTLNTYVHLSNQDMKEEFKKYLEGRDK"
     CDS             1216..3114
                     /gene="tnpB"
                     /codon_start=1
                     /product="Tn554 transposase"
                     /translation="MTMNTKRKIISSVAIGKKIAEMNSKLEGYWADDRWDIRKCPLPS
                     AIELSKSPSLRNRWVNFDRVENLWLRTELKFFFYYHMTNEVWNAKTVWIRKGTVINKM
                     LGFLDMKYPHIESITEVPIEKAMTEYRTYLVEQGVRITTTNHKLNAKQERITVKANSY
                     YVTNLKQFMEFYEDYYFDGEEWEKDVWDRRKMNLPSDKVNPTQYEYLVSFKEIPSIYY
                     RELTKRYCKLKLNTVSFSHVSDIAGRLKEFFVFLNKNYKHLTRLHQLTREQIEHYLAE
                     LNKSGIKPSTLMGKISVLDGFFTTIQKFDWNDVPSKILVFQEDYPKVPKATPRYIDEY
                     VLEQLNSHLDDLPAYIATMVMIIQEGGMRISELCTLKRDCLLEDKEGDYFLKYYQWKM
                     KKEHTIPISREVAGLIKAHEKHVSEEFGGCEYLFPRKDGSPLKQDTFRRELNEVAHKK
                     NIVDRAGSVFRFHAHAFRHTVGTRMINNGIPQHIVQKFLGHESPEMTSRYAHIFDETL
                     KEEFSKFKETLVTNQGSIIDIEESEEANKTDLQWFKKNINAQVLPNGYCRLPIIAGPC
                     PHANACLDCTHFCTSKKFLSQHKDHLAHTKELLAIAKEKQWQRQIETNSRVQERLEQI
                     IGSLKETE"
     CDS             3115..3498
                     /gene="tnpC"
                     /codon_start=1
                     /product="Tn554 transposase"
                     /translation="MGKQSRNTDKIIQLAKEKSHNTRLNVEKIISKMSLEGKTINFNT
                     VAAEAKVSKSWLYKESDIRKQIENIRHRQLNGKRLNFTPIKKNKKSEEILIETLKARI
                     KELEEENGQLKNQVQKLYGELYFKD"
     CDS             3815..5389
                     /gene="vga(A)"
                     /codon_start=1
                     /product="ABC-F type ribosomal protection protein"
                     /translation="MKILLEALRIKPYVQDRLLLNIDQLQIYQNDRIGLVGGNGSGKT
                     TLLHILDEKLFPEEGTVTQYSRCELIPQLKHMETTKSGGEVTRKYIQQALDKNPELLL
                     ADEPTTNLDTNYIENLERKLKDWHGAFIIVSHDRAFLDTLCTSIWEIKDGGITEYKGN
                     YSDYIEQKELENRQEQLAHEKYEKEKKQLEEAIKLKEEKAQRATKKPKNISSSEARLK
                     GAKPYFANKQKKLRKTAKALETRLDKLEKVEKTKELPPLKMDLLNSETFKNRIILRVE
                     DVSGVIEERVLWKAASFYVRGGDKLAIIGSNGTGKTTFIKKIVQDKPGISFSPSVKIG
                     YFSQNLDILELDKTILENVQSSSRQNETLIRTILARMHFFRDDVHKPVNVLSGGERVK
                     VALTKVFLSDVNTLVLDEPTNFLDMEAIEAFESLLEEYEGSVIFVSHDRRFIEKIATR
                     IMMIDNKEIKIFEGTYDQFKAKQAREETRDIKEDKKLLLETRITEILSRLSIEPSEEL
                     EKEFQNLINEKRNLDN"
ORIGIN      
        1 ttaaacgtag tatactaatc tatagtactt aaagtattta aagaaagtat aatggatgat
       61 atactacttt gggtacatta tatcaatagg agaaatataa agtatataaa gtattcaaag
      121 tgggggagga aaaatgaaag tgcaaaaaat agtagtggat aataaagctt atccactatt
      181 tatattgctt gatgaacaat ttgaagtagt tgaaccggtt atgagcttca ttaaatatct
      241 agataatact aataagtcac ccaacactat aaaaacatat tgttaccacc taaagttatt
      301 ttatgtgttt atgcagcaaa gaaaaatctc gttagacgaa attcagtttg acgagttggc
      361 gaattttgta ggatggttac gtaaccccac agaaaacgcg aatgttattg acattcaccc
      421 aaaagaagct aaaagagagg aatctactgt taatgctatt cttaatgccg tgattagtta
      481 tctagaatat ttgagtcgtt ctggtggctt taaaatgctt gatttgttca atgaaacacg
      541 aggcagaaac tacaaaggat ttctccatca tgtgagtaaa ggaaagccat ataaaagaaa
      601 cgtattgaag ttaagggaaa aaaagaaaat gattaggaca ctaaatcatt cagaggtaaa
      661 agaaatcgta gaagcctgtc acaccctcag agataaatta atcataatgc ttatgtatga
      721 aggtgggatg cgaataggag aggttttgtc tctaagactg gcagacatag tgacttggga
      781 taatcaggtt cacataacac ctagagaaga aagtctgaat ggagcttaca taaagcttag
      841 aaaagaaaga gtaatccatg ttagcaaaga gttaatggct ctctatacag actatcttgt
      901 gcatgaatac tacgatgaat tagagcatga ttatgtattt atagcattaa aagaatcgca
      961 ttttgggcag cctttaaaat atcaaagtgt actcgatctc gttcggcggt tgaataaaag
     1021 aacaggtatt gtgtttacac ctcatacgtt acgccatacc catgcgacag aactgattag
     1081 aaatggttgg gatgctgctt acgtccaaaa aagattagga cacgcacagg ttcagaccac
     1141 tttaaacaca tacgtccacc tctctaacca agatatgaaa gaagaattta aaaagtatct
     1201 tgaagggaga gataaatgac gatgaatacc aaaagaaaaa ttataagctc tgtagcaatt
     1261 ggtaaaaaaa tagcagaaat gaacagcaaa ttagaaggat attgggctga tgatagatgg
     1321 gatatcagaa agtgcccact accttcagca atcgaacttt ctaaaagccc atctttaaga
     1381 aaccgatggg taaattttga ccgagttgaa aatttgtggt taagaaccga attgaaattc
     1441 tttttctatt accacatgac caatgaggtt tggaatgcta aaaccgtgtg gattagaaaa
     1501 ggaactgtaa ttaataaaat gttgggtttc ttagatatga aatatcctca catagagtca
     1561 atcacagaag taccaattga aaaagctatg actgaataca ggacttactt agtagagcaa
     1621 ggagtcagaa taacaactac caatcacaag ctaaatgcca aacaagaaag aatcacagta
     1681 aaggcaaatt catactatgt gacaaatctt aagcagttta tggagtttta tgaagattat
     1741 tattttgacg gagaagaatg ggaaaaggat gtttgggata gaagaaaaat gaatctccct
     1801 tctgataaag tcaatcccac tcaatatgag tatctcgtat ctttcaaaga gattcctagt
     1861 atttattaca gagagctgac aaaacgatat tgcaagctca aattaaacac cgtgagcttt
     1921 tctcatgtaa gcgatatcgc aggcaggttg aaagagtttt ttgtatttct taataaaaat
     1981 tataaacatt taacaagact tcatcagctt acccgagagc aaattgaaca ctacttggca
     2041 gaactgaata aatcaggaat taaaccgagc actttaatgg ggaaaatatc ggttttggac
     2101 ggtttcttta ctacaattca gaagtttgat tggaatgacg ttccttcaaa gatactagtt
     2161 ttccaagaag attatcctaa ggtaccgaaa gcaacaccga gatatattga tgaatacgtt
     2221 ttggagcaat taaacagtca tttagatgat ttacctgctt atatagcaac tatggtaatg
     2281 atcattcaag aaggtggtat gagaatcagt gagttgtgta ctttgaaaag agattgcctt
     2341 ctcgaagata aggaaggtga ttacttttta aaatattacc aatggaaaat gaaaaaagaa
     2401 catactattc cgatatcgag agaggtagct ggtcttatta aggcacatga aaagcatgtg
     2461 tcagaggagt ttggtggatg tgaatacctc tttcctcgta aagatggctc tccattgaaa
     2521 caggatactt ttagacggga actaaacgag gtggcacata agaaaaatat cgtggatcga
     2581 gcaggaagcg tttttagatt ccacgcacac gcatttcggc ataccgttgg tacaagaatg
     2641 attaataatg gcattcctca acatattgtc cagaaatttt taggacatga aagcccggaa
     2701 atgacgagca gatatgccca cattttcgat gaaacattaa aggaagagtt ctctaaattc
     2761 aaagagacgc ttgtgacaaa tcagggcagc attattgaca tagaagaatc cgaagaagcc
     2821 aataaaactg atcttcaatg gttcaagaag aacattaacg ctcaggtatt gcccaatggc
     2881 tattgtcgac tcccgataat cgctggtcct tgtcctcacg ccaatgcttg tttagactgc
     2941 acacacttct gtacaagcaa aaagttctta tcgcaacata aagatcactt agctcatact
     3001 aaggaattat tagctatcgc aaaagagaaa caatggcaac gacagattga aaccaattct
     3061 cgtgtacaag agcgactaga gcagataata ggcagcttaa aggagacgga gtaaatgggg
     3121 aaacaatcaa ggaatactga taagattatt caactggcaa aagaaaaaag tcacaatact
     3181 agactaaatg tagaaaagat aatttcaaaa atgtcattag aaggcaaaac tataaatttt
     3241 aatacagtag ctgcagaagc aaaagtctcg aaatcttggt tgtataaaga aagtgatata
     3301 agaaaacaaa ttgaaaatat ccgacatcgc caactcaatg gaaaaagatt gaactttacg
     3361 cctataaaga aaaataaaaa atcagaagaa atacttatcg aaacgctaaa agcgaggata
     3421 aaagaattag aggaagaaaa tggtcaattg aaaaatcaag ttcagaaatt atatggtgag
     3481 ctttatttta aagactagaa agaatactct gacttaaaca tttgacattt ccccgtcatt
     3541 tgtttaaggt aaatttaatt agacgaagga aagggtgaac caactacatg attaactaat
     3601 cctatttttg aaagtaaaca atcgaaggtg tttgatttac aaatgatgtt ttatttgtgc
     3661 tgccttcaat tgtgatcttc aggataggat taaatttctg tagttggctc taaaagagtc
     3721 ttttttagag tacatctata ttgatttatg cctcctattc tgaatgaatt aggaggcatt
     3781 tattgtctcc gattattttt aaggggatga taatatgaaa atattgttag aggctcttcg
     3841 tataaaaccc tatgttcaag atcgtttact gttgaacata gatcaattac agatttatca
     3901 gaatgaccga attgggttag ttggtggaaa tggcagtgga aaaacaacgt tacttcacat
     3961 attggatgaa aagctttttc ctgaagaagg tactgtaact cagtattcac ggtgcgaact
     4021 cattccacaa ttgaaacata tggaaacaac aaaaagtggt ggtgaagtaa cacgaaaata
     4081 tattcagcaa gcacttgata aaaacccaga actgttacta gcagatgaac cgacaactaa
     4141 ccttgataca aattatatag aaaacttaga gcgaaaatta aaggactggc atggagcatt
     4201 tatcatcgtt tcacatgatc gtgctttctt agatactctt tgtacgagta tatgggaaat
     4261 caaagacggg ggtataaccg aatacaaagg gaactatagt gactatattg agcagaaaga
     4321 attagaaaat cgccaagagc aattagcaca tgaaaaatat gaaaaagaaa agaaacagtt
     4381 agaagaggcc ataaagttaa aagaagagaa agctcaacga gctactaaga aaccgaaaaa
     4441 tataagttca tcggaagcaa ggctaaaagg agcgaagcca tacttcgcaa ataaacagaa
     4501 gaagttacgg aaaacggcaa aagctctaga aactagactg gataagcttg aaaaggtaga
     4561 aaaaacaaaa gaactacccc cacttaaaat ggatttattg aattcagaga cttttaaaaa
     4621 tcggattata ctccgtgttg aagatgtttc gggtgtaatt gaggaacgag tattgtggaa
     4681 agcagctagt ttttacgttc gaggaggaga taagctggca attatcggct ctaacggtac
     4741 gggcaagacc acctttatta aaaaaattgt tcaggataag ccaggtattt cattttcacc
     4801 atctgttaaa attggttact ttagccagaa tctagacata ttagagctcg acaagactat
     4861 tttagaaaac gtccaatctt cttcacggca aaatgaaact cttattcgaa ccattctagc
     4921 gagaatgcat tttttcagag atgatgttca taaaccagta aatgtcttaa gtgggggaga
     4981 gcgagttaag gtagcactaa ctaaagtgtt cttaagtgat gttaatacgt tagtattaga
     5041 tgaaccaaca aactttcttg atatggaggc tatagaggcg tttgaatcct tattagagga
     5101 gtatgaagga agcgtaattt ttgtctccca tgatcgtagg tttatcgaaa aaatagctac
     5161 ccgaatcatg atgattgata ataaagaaat taaaatattt gaaggaacat atgaccaatt
     5221 taaagctaaa caagctaggg aggaaacacg ggatataaaa gaggataaaa aacttttact
     5281 tgaaacaagg attactgaga tactcagtcg attgagtatt gaaccttcgg aggaattaga
     5341 aaaagagttc caaaacctaa ttaacgagaa aagaaattta gataattgaa tcactttaag
     5401 gacatgtctt taaagtgtaa aggttattac aatcggcttt tttatggatt actcttgata
     5461 t
//
