LOCUS       ISPpu12                 3372 bp    DNA     linear       29-SEP-2020
DEFINITION  Pseudomonas putida.
ACCESSION   
VERSION
KEYWORDS    .
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Unclassified.
REFERENCE   1  (bases 1 to 3372)
  AUTHORS   Zhou,D.
  TITLE     Complete sequence of ISPpu12
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3372)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Beijing, Beijing 100071, China
FEATURES             Location/Qualifiers
     source          1..3372
                     /organism="Pseudomonas putida"
                     /mol_type="genomic DNA"
     repeat_region   1..24
                     /gene="IRL_ISPpu12"
     CDS             complement(88..495)
                     /codon_start=1
                     /product="PnbR-like regulatory protein"
                     /translation="MRIGQLAQLVGVETQTIRFYEQQGLLPPPDRQDNGYRVYTEKHV
                     ERLAFIRRCRILDLSLAEIHELKRYQDDPHQPCTAVNALLDDHISHVRSQITALQALE
                     KQLVSLRASCNDDREVEACGVLAGISEGNMHQQ"
     CDS             591..1487
                     /codon_start=1
                     /product="Putative membrane/transport protein"
                     /translation="MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPS
                     EERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVEPVTSKLKTLGLGASLQETVAAN
                     PETIKAAEFSAASAKQESGTLRWLLGINALLFVVEMTAGLIARSTGLIGESLDNFADA
                     AVYGLALYAVGHSVKMQVRAAHLAGVLQLILAVGVLVEVVRRFVFGSEPESLVMMAIA
                     FVALIANTSCLLLISKHREGGAHMKASWIFSANDVVINLGVITAGALVAWTGSNYPDL
                     IIGTIAGGIVLNGARRILALKG"
     CDS             1491..2003
                     /gene="lspA"
                     /codon_start=1
                     /product="Putative lipoprotein signal peptide-like"
                     /translation="MLIIGKKLSPYALLSISGLLAASDQAVKWLVQQSMAYGEYVSVT
                     PFFNWVHLWNTGAAFSLFANGGGWQRYFFIGIAVVVSIFLIKLILENRHKGEAIAYSL
                     ILGGAMGNLIDRVFRGYVVDSFDFYWRDWHWPAFNLADIAIVLGALLFVSSSLLGKKA
                     NTNAESDGSD"
     CDS             2100..3314
                     /gene="tnpA"
                     /codon_start=1
                     /product="ISPpu12 transposase"
                     /translation="MHFQVDVPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTL
                     WVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEK
                     TVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQD
                     VVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVR
                     KGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFY
                     GIWDATTRLQAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAY
                     TESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFA
                     EELNYGVDLSTI"
     repeat_region   3349..3372
                     /gene="IRR_ISPpu12"
ORIGIN      
        1 gggtaagcgg attaaatggt tgatcttacc tttgcatgag agtgagacag accggcatct
       61 catcggatta tctggttgat gcttcaccta ctgctggtgc atgtttcctt cgctaattcc
      121 agcaagaacc ccacacgcct caacttcccg gtcatcgttg caactcgctc tcagtgaaac
      181 gagttgtttc tcaagcgctt gcagagcggt tatctgcgac cgcacatgag agatgtgatc
      241 atcgagcaag gcgttgacgg cggtacaagg ctgatgaggg tcgtcctgat agcgctttag
      301 ttcgtgaatt tctgccagtg acagatccag gatgcggcag cgacgaataa aggccagccg
      361 ctcaacgtgt ttctcggtat agacacggta accgttgtcc tgccgatcag gcggcggcaa
      421 caagccctgc tgttcataga agcggatcgt ctgtgtttcg acccctacca actgcgccaa
      481 ctgaccaatg cgcatcagcc tcctccccaa cggattcttt actctattga ccttatagta
      541 gctttatagt tttaaatggt accacaacat tgttcaagtg gagtcgtatc atgagcaaat
      601 cctgtggtgg cgcctgtggc ggtgatgcaa cgtccgcagc ggataccgat atacaggcct
      661 cctccgaggc gccagggaga tgggtcagtg tttatgccgt gccgaagatg gactgtccat
      721 cagaagaacg aatgattcgc ctagccctga acggctttga ggagattcgg gcgctgtcct
      781 tcgacttgtc gaaccgccgg ctgaaggtcg tgcatgacgg cgaggtcgag cccgtcacct
      841 cgaaactgaa gaccttgggg ctaggcgcct cgcttcagga aaccgtcgct gcaaatccgg
      901 agaccatcaa ggccgccgag ttttcggcag cttctgctaa gcaagaatcc gggaccctgc
      961 gctggttgct cggcatcaat gcacttctgt tcgtggtgga aatgactgcc ggtctgatcg
     1021 cccggtccac cggcctgatt ggagaatccc tggacaattt tgccgatgcg gcggtgtacg
     1081 ggcttgccct ttatgcggtt ggacatagcg tgaaaatgca ggtacgtgcc gcgcatcttg
     1141 ctggtgtact gcaactgatc ttggctgtgg gcgtgctcgt agaggtggtg agacgctttg
     1201 tattcggtag tgagcctgaa tcgctggtga tgatggctat cgcattcgtc gcattgattg
     1261 ccaataccag ttgtctgctg ctcatatcca aacatcggga aggcggggcg cacatgaagg
     1321 caagctggat attctcggcc aacgacgtgg tgatcaacct gggggtcatc accgccggcg
     1381 ccctggtcgc gtggaccggt tccaattatc cggatctgat tatcggcacc atcgcggggg
     1441 gcattgtact taacggtgcc agacgcattt tggcgttgaa gggttaaata atgctcatta
     1501 ttggcaaaaa gctctcgccg tatgccctat tgtccatatc gggcctgctg gcagcgtctg
     1561 atcaggctgt aaagtggctg gtgcagcaat caatggccta tggcgagtat gtttcggtga
     1621 ccccgttctt taactgggtg cacctatgga acaccggtgc cgcattcagt ctttttgcga
     1681 atggtggagg ctggcagcgc tactttttta tcggaatcgc ggtagtggtc tcgatttttc
     1741 tgatcaagct gatccttgaa aatcgtcata aaggagaagc catcgcttac agtcttatcc
     1801 tcggtggcgc catgggcaac ctgattgacc gggtctttcg cggctatgtt gtggattcct
     1861 ttgatttcta ttggcgagac tggcattggc cggccttcaa cctggctgat attgcaattg
     1921 tcctcggtgc cttacttttc gtttccagca gcttgttggg taaaaaagca aacaccaatg
     1981 ccgagtcgga tggatctgac tgacacctac gcctatacaa caccatgacc gaacttcccg
     2041 acaacatcct tcacctgccg caataccaag tactgggctg caaatcaacc gacgacgaaa
     2101 tgcacttcca ggtggacgtg cccgatccca tcgcctgcga ggaatgcggc gtgcagggtg
     2161 agttcgtacg gttcggcaag cgtgacgttc cctatcgtga tctgcccatc cacggcaagc
     2221 gggtcactct ctgggtggtc cgccgccgat acacctgccg ggcctgcaag acaacattca
     2281 ggccccagct accggagatg gtggacggat tccgtatgac actgcggctg catgagtacg
     2341 tggagaagga atccttcaac cacccctaca cctttgtggc ggcacagacc ggcctggacg
     2401 agaagacggt gcgcgacatc ttcaacgccc gcgccgagtt cctggggcgc tggcaccgct
     2461 tcgagacgcc ccgcatcctg ggcattgacg agctatacct gaacaagcgc taccgctgca
     2521 ttctgaccaa cattgaggag cgaaccctgc tcgacctgct ggccacccgc cgccaggacg
     2581 tggtgaccaa ctacctgatg aagctgaaag accggcagaa ggtcgagatc gtcagcatgg
     2641 acatgtggaa cccctaccgg gcagcggtca aggctgtgct gccccaggcc cgtatcgtgg
     2701 tcgataagtt ccatgtggtg cgcatggcca acgatgccct agagagagtg cgcaagggcc
     2761 tcagaaagga gctgaaaccg tcccagagcc ggactctcaa gggagaccgg aaaatcctgc
     2821 tgaaacgcgc tcacgaagtc tcagaccggg agcgcctcat catggagacc tggacaggcg
     2881 cgttcccgca actgctggcc gcctacgagc acaaggagcg cttctacggc atctgggacg
     2941 ccaccacacg gctccaggca gaagccgccc tggacgagtg gatagccacc atcccgaagg
     3001 gccaaaagga agtctggagc gatctggtca gggcagtggg aaactggcgc gaagagacca
     3061 tgacctactt cgagacggac atgcccgtca ccaacgctta cacggagtcc atcaaccgac
     3121 tggccaagga caagaaccgt gaagggcgcg gttactcctt cgaggtgatg cgggcacgaa
     3181 tgctctacac cacgaagcac aagaagaagg caccgactgc gaaggtctct cctttctaca
     3241 agaaaaccat cggttacgga ctgccggact tcgcagagga actcaactac ggagtcgatc
     3301 tatcaaccat ctgagggtgg tatcagattg atggggtgaa ggtgccccat caaccattaa
     3361 atccgtatac cc
//
