LOCUS       In1776                  5842 bp    DNA     linear       29-SEP-2020
DEFINITION  Klebsiella pneumoniae.
ACCESSION   
VERSION
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Unclassified.
REFERENCE   1  (bases 1 to 5842)
  AUTHORS   Zhou,D.
  TITLE     Complete sequence of In1776
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5842)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Beijing, Beijing 100071, China
FEATURES             Location/Qualifiers
     source          1..5842
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
     CDS             complement(1..1014)
                     /gene="intI1"
                     /codon_start=1
                     /product="Integrase"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLPTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQ
                     EIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
                     DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALER
                     KYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATP
                     HTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLT
                     SER"
     misc_recomb     1095..1157
                     /gene="attI1"
     CDS             1159..1656
                     /gene="dfrA12"
                     /codon_start=1
                     /product="Dihydrofolate reductase"
                     /translation="MNSESVRIYLVAAMGANRVIGNGPNIPWKIPGEQKIFRRLTEGK
                     VVVMGRKTFESIGKPLPNRHTLVISRQANYRATGCVVVSTLSHAIALASELGNELYVA
                     GGAEIYTLALPHAHGVFLSEVHQTFEGDAFFPMLNETEFELVSTETIQAVIPYTHSVY
                     ARRNG"
     misc_recomb     1651..1734
                     /gene="attC_dfrA12"
     CDS             1768..2058
                     /gene="gcuF"
                     /codon_start=1
                     /product="Hypothetical protein"
                     /translation="MFIQTAFSFSGVIQCLFCLFSGLRLHGLRRFSVFLASSPCVASA
                     SSYRFCSAVPPRWRSVFSRLAPVAKFKLSVLASGSNISVKPTRILRSAYLAR"
     misc_recomb     2001..2060
                     /gene="attC_gcuF"
     misc_feature    2064..2118
                     /gene="truncated aadA2-5'"
                     /product="Truncated aminoglycoside 3'-adenyltransferase,
                     5' fragment (pseudogene)"
     repeat_region   complement(2109..2118)
                     /gene="DR_ISVsa5"
     repeat_region   complement(2119..2140)
                     /gene="IRR_ISVsa5"
     CDS             complement(2132..3340)
                     /gene="tnpA"
                     /codon_start=1
                     /product="ISVsa5 transposase tnpA"
                     /translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
                     GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
                     EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
                     DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
                     LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIR
                     TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
                     AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNL
                     FTHGYALGKL"
     repeat_region   complement(3426..3447)
                     /gene="IRL_ISVsa5"
     repeat_region   complement(3447..3456)
                     /gene="DR_ISVsa5"
     misc_feature    3457..4193
                     /gene="truncated aadA2-3'"
                     /product="Truncated aminoglycoside 3'-adenyltransferase,
                     3' fragment (pseudogene)"
     misc_recomb     4195..4254
                     /gene="attC_aadA2"
     CDS             4357..4704
                     /gene="qacEDl"
                     /codon_start=1
                     /product="Quaternary ammonium compound resistance protein"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
     CDS             4698..5537
                     /gene="sul1"
                     /codon_start=1
                     /product="Dihydropteroate synthase"
                     /translation="MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDV
                     GPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLND
                     IQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSAL
                     RRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGAT
                     VGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGL
                     DHA"
     misc_feature    5665..5842
                     /gene="truncated orf5"
                     /product="Truncated hypothetical protein"
ORIGIN      
        1 ctacctctca ctagtgaggg gcggcagcgc atcaagcggt gagcgcactc cggcaccgcc
       61 aactttcagc acatgcgtgt aaatcatcgt cgtagagacg tcggaatggc cgagcagatc
      121 ctgcacggtt cgaatgtcgt aaccgctgcg gagcaaggcc gtcgcgaacg agtggcggag
      181 ggtgtgcggt gtggcgggct tcgtgatgcc tgcttgttct acggcacgtt tgaaggcgcg
      241 ctgaaaggtc tggtcataca tgtgatggcg acgcacgaca ccgctccgtg gatcggtcga
      301 atgcgtgtgc tgcgcaaaaa cccagaacca cggccaggaa tgcccggcgc gcggatactt
      361 ccgctcaagg gcgtcgggaa gcgcaacgcc gctgcggccc tcggcctggt ccttcagcca
      421 ccatgcccgt gcacgcgaca gctgctcgcg caggctgggt gccaagctct cgggtaacat
      481 caaggcccga tccttggagc ccttgccctc ccgcacgatg atcgtgccgt gatcgaaatc
      541 cagatccttg acccgcagtt gcaaaccctc actgatccgc atgcccgttc catacagaag
      601 ctgggcgaac aaacgatgct cgccttccag aaaaccgagg atgcgaacca cttcatccgg
      661 ggtcagcacc accggcaagc gccgcgacgg ccgaggtctt ccgatctcct gaagccaggg
      721 cagatccgtg cacagcacct tgccgtagaa gaacagcaag gccgccaatg cctgacgatg
      781 cgtggagacc gaaaccttgc gctcgttcgc cagccaggac agaaatgcct cgacttcgct
      841 gctgcccaag gttgccgggt gacgcacacc gtggaaacgg atgaaggcac gaacccagtg
      901 gacataagcc tgttcggttg gtaagctgta atgcaagtag cgtatgcgct cacgcaactg
      961 gtccagaacc ttgaccgaac gcagcggtgg taacggcgca gtggcggttt tcatggcttg
     1021 ttatgactgt ttttttgtac agtctatgcc tcgggcatcc aagcagcaag cgcgttacgc
     1081 cgtgggtcga tgtttgatgt tatggagcag caacgatgtt acgcagcagg gcagtcgccc
     1141 taaaacaaag ttagccatat gaactcggaa tcagtacgca tttatctcgt tgctgcgatg
     1201 ggagccaatc gggttattgg caatggtcct aatatcccct ggaaaattcc gggtgagcag
     1261 aagatttttc gcagactcac tgagggaaaa gtcgttgtca tggggcgaaa gacctttgag
     1321 tctatcggca agcctctacc gaaccgtcac acattggtaa tctcacgcca agctaactac
     1381 cgcgccactg gctgcgtagt tgtttcaacg ctgtcgcacg ctatcgcttt ggcatccgaa
     1441 ctcggcaatg aactctacgt cgcgggcgga gctgagatat acactctggc actacctcac
     1501 gcccacggcg tgtttctatc tgaggtacat caaaccttcg agggtgacgc cttcttccca
     1561 atgctcaacg aaacagaatt cgagcttgtc tcaaccgaaa ccattcaagc tgtaattccg
     1621 tacacccact ccgtttatgc gcgtcgaaac ggctaaccat tccgtcaacg ggacgccaaa
     1681 atgctgcgca ttttggttcc ctccgctgcg ctccggctct cgttacgtcc aacgttagca
     1741 ccactgaaac ccagctttat ttagctcatg tttattcaaa cggcatttag cttttcaggc
     1801 gttattcagt gcctgttttg ccttttttcc gggcttcgcc tgcatgggct gcgcaggttt
     1861 tcagtctttt tggcctctag cccttgcgta gcaagcgcaa gcagctatcg tttttgcagt
     1921 gctgtgccgc ctcggtggcg cagcgttttt tcacggttag cgcccgtcgc caaattcaag
     1981 ttatccgttt tggcttctgg ttctaacatt tcggtcaagc cgacccgcat tctgcggtcg
     2041 gcttacctcg cccgttagac atcatgaggg aagcggtgac catcgaaatt tcgaaccaac
     2101 tatcagaggt gctaagcgct gagagatccc ctcataattt ccccaaagcg taaccatgtg
     2161 tgaataaatt ttgagctagt agggttgcag ccacgagtaa gtcttccctt gttattgtgt
     2221 agccagaatg ccgcaaaact tccatgccta agcgaactgt tgagagtacg tttcgatttc
     2281 tgactgtgtt agcctggaag tgcttgtccc aaccttgttt ctgagcatga acgcccgcaa
     2341 gccaacatgt tagttgaagc atcagggcga ttagcagcat gatatcaaaa cgctctgagc
     2401 tgctcgttcg gctatggcgt aggcctagtc cgtaggcagg acttttcaag tctcggaagg
     2461 tttcttcaat ctgcattcgc ttcgaataga tattaacaag ttgtttgggt gttcgaattt
     2521 caacaggtaa gttagttgct agaacccatg gctcctttgc cgacgctgag tagattttag
     2581 gtgacgggtg gtgacaatga gtccgtgtcg agcgctgatt ttttcggcct ttagagcgag
     2641 atttatacaa tagaatttgg catgagattg gattgctttt agtcagcctc ttatagccta
     2701 aagtctttga gtgactagat gacatatcat gtaagttgct gataggtttc cagttttccg
     2761 ctcctaggtc tgcatattgt acttttcctc ttactcgact taaccagtac caacccagct
     2821 tctcaacgga tttataccat ggcactttaa agccagcatc actgacaatg agcggtgtgg
     2881 tgttactcgg tagaatgctc gcaaggtcgg ctagaaattg gtcatgagct ttctttgaac
     2941 attgctctga aagcgggaac gctttctcat aaagagtaac agaacgaccg tgtagtgcga
     3001 ctgaagctcg caataccata agtcgttttt gctcacgaat atcagaccag tcaacaagta
     3061 caatgggcat cgtattgccc gaacagataa agctagcatg ccaacggtat acagcgagtc
     3121 gctctttgtg gaggtgacga ttacctaaca atcggtcgat tcgtttgatg ttatgttttg
     3181 ttctcgcttt ggttggcagg ttacggccaa gttcggtaag agtgagagtt ttacagtcaa
     3241 gtaatgcgtg gcaagccaac gttaagctgt tgagtcgttt taagtgtaat tcggggcaga
     3301 attggtaaag agagtcgtgt aaaatatcga gttcgcacat cttgttgtct gattattgat
     3361 ttttcgcgaa accatttgat catatgacaa gatgtgtatc caccttaact taatgatttt
     3421 taccaaaatc attaggggat tcatcagtgc taagcgtcat tgagcgccat ctggaatcaa
     3481 cgttgctggc cgtgcatttg tacggctccg cagtggatgg cggcctgaag ccatacagcg
     3541 atattgattt gttggttact gtggccgtaa agcttgatga aacgacgcgg cgagcattgc
     3601 tcaatgatct tatggaggct tcggctttcc ctggcgagag cgagacgctc cgcgctatag
     3661 aagtcaccct tgtcgtgcat gacgacatca tcccgtggcg ttatccggct aagcgcgagc
     3721 tgcaatttgg agaatggcag cgcaatgaca ttcttgcggg tatcttcgag ccagccatga
     3781 tcgacattga tctagctatc ctgcttacaa aagcaagaga acatagcgtt gccttggtag
     3841 gtccggcagc ggaggaattc tttgacccgg ttcctgaaca ggatctattc gaggcgctga
     3901 gggaaacctt gaagctatgg aactcgcagc ccgactgggc cggcgatgag cgaaatgtag
     3961 tgcttacgtt gtcccgcatt tggtacagcg caataaccgg caaaatcgcg ccgaaggatg
     4021 tcgctgccga ctgggcaata aaacgcctac ctgcccagta tcagcccgtc ttacttgaag
     4081 ctaagcaagc ttatctggga caaaaagaag atcacttggc ctcacgcgca gatcacttgg
     4141 aagaatttat tcgctttgtg aaaggcgaga tcatcaagtc agttggtaaa tgatgtctaa
     4201 caattcgttc aagccgaccg cgctacgcgc ggcggcttaa ctccggcgtt agatgcacta
     4261 agcacataat tgctcacagc caaactatca ggtcaagtct gcttttatta tttttaagcg
     4321 tgcataataa gccctacaca aattgggaga tatatcatga aaggctggct ttttcttgtt
     4381 atcgcaatag ttggcgaagt aatcgcaaca tccgcattaa aatctagcga gggctttact
     4441 aagcttgccc cttccgccgt tgtcataatc ggttatggca tcgcatttta ttttctttct
     4501 ctggttctga aatccatccc tgtcggtgtt gcttatgcag tctggtcggg actcggcgtc
     4561 gtcataatta cagccattgc ctggttgctt catgggcaaa agcttgatgc gtggggcttt
     4621 gtaggtatgg ggctcataat tgctgccttt ttgctcgccc gatccccatc gtggaagtcg
     4681 ctgcggaggc cgacgccatg gtgacggtgt tcggcattct gaatctcacc gaggactcct
     4741 tcttcgatga gagccggcgg ctagaccccg ccggcgctgt caccgcggcg atcgaaatgc
     4801 tgcgagtcgg atcagacgtc gtggatgtcg gaccggccgc cagccatccg gacgcgaggc
     4861 ctgtatcgcc ggccgatgag atcagacgta ttgcgccgct cttagacgcc ctgtccgatc
     4921 agatgcaccg tgtttcaatc gacagcttcc aaccggaaac ccagcgctat gcgctcaagc
     4981 gcggcgtggg ctacctgaac gatatccaag gatttcctga ccctgcgctc tatcccgata
     5041 ttgctgaggc ggactgcagg ctggtggtta tgcactcagc gcagcgggat ggcatcgcca
     5101 cccgcaccgg tcaccttcga cccgaagacg cgctcgacga gattgtgcgg ttcttcgagg
     5161 cgcgggtttc cgccttgcga cggagcgggg tcgctgccga ccggctcatc ctcgatccgg
     5221 ggatgggatt tttcttgagc cccgcaccgg aaacatcgct gcacgtgctg tcgaaccttc
     5281 aaaagctgaa gtcggcgttg gggcttccgc tattggtctc ggtgtcgcgg aaatccttct
     5341 tgggcgccac cgttggcctt cctgtaaagg atctgggtcc agcgagcctt gcggcggaac
     5401 ttcacgcgat cggcaatggc gctgactacg tccgcaccca cgcgcctgga gatctgcgaa
     5461 gcgcaatcac cttctcggaa accctcgcga aatttcgcag tcgcgacgcc agagaccgag
     5521 ggttagatca tgcctagcat tcaccttccg gccgcccgct agcggaccct ggtcaggttc
     5581 cgcgaaggtg ggcgcagaca tgctgggctc gtcaggatca aactgcacta tgaggcggcg
     5641 gttcataccg cgccagggga gcgaatggac agcgaggagc ctccgaacgt tcgggtcgcc
     5701 tgctcgggtg atatcgacga ggttgtgcgg ctgatgcacg acgctgcggc gtggatgtcc
     5761 gccaagggaa cgcccgcctg ggacgtcgcg cggatcgacc ggacattcgc ggagaccttc
     5821 gtcctgagat ccgagctcct ag
//
